biothings. To fix this you can add URL: https://sdhutchins.r-universe.dev/BioThingsClient.R to the package DESCRIPTION file. See also theR-universe documentation.Package: BioThingsClient.R 0.99.1
Thomas Johnson
BioThingsClient.R: BioThings Client (https://github.com/biothings/BioThingsClient.R)
This is a unified R client for all "BioThings APIs" (more at http://biothings.io). BioThings APIs are a collection of high-performance APIs for variety of aggregated entity-type specific annotations, such as genes, variants, chemicals, drugs etc. (so called "BioThings"). It also provides a SDK (BioThings SDK) for users to build their own BioThings API for any biological entity types. This client provides a generic R library for existing BioThings APIs as well as the new BioThings APIs will be created in the future, either by us or users.
Authors:
BioThingsClient.R_0.99.1.tar.gz
BioThingsClient.R_0.99.1.zip(r-4.7)BioThingsClient.R_0.99.1.zip(r-4.6)BioThingsClient.R_0.99.1.zip(r-4.5)
BioThingsClient.R_0.99.1.tgz(r-4.6-any)BioThingsClient.R_0.99.1.tgz(r-4.5-any)
BioThingsClient.R_0.99.1.tar.gz(r-4.7-any)BioThingsClient.R_0.99.1.tar.gz(r-4.6-any)
BioThingsClient.R_0.99.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
BioThingsClient.R/json (API)
NEWS
| # Install 'BioThingsClient.R' in R: |
| install.packages('BioThingsClient.R', repos = c('https://sdhutchins.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/biothings/biothingsclient.r/issues
variantannotationannotationgenomicvariationapiapi-clientbiothingsbiothings-apis
Last updated from:ba76366feb. Checks:7 ERROR, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | ERROR | 197 | ||
| source / vignettes | OK | 268 | ||
| linux-release-x86_64 | ERROR | 166 | ||
| macos-release-arm64 | ERROR | 145 | ||
| macos-oldrel-arm64 | ERROR | 89 | ||
| windows-devel | ERROR | 112 | ||
| windows-release | ERROR | 95 | ||
| windows-oldrel | ERROR | 100 | ||
| wasm-release | OK | 123 |
Exports:biothings_clientsBioThingsClientbtFieldsbtGetbtMetadatabtQuery
Dependencies:askpassbackportsbase64encbslibcachemcheckmatecliclustercolorspacecpp11curldata.tabledigestevaluatefarverfastmapfontawesomeforeignFormulafsggplot2gluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrisobandjquerylibjsonliteknitrlabelinglifecyclemagrittrmemoisemimennetopensslR6rappdirsRColorBrewerrlangrmarkdownrpartrstudioapiS7sassscalesstringistringrsystinytexvctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| BioThings API Client Configuration | biothings_clients |
| BioThingsClient | BioThingsClient BioThingsClient-class |
| btFields | btFields btFields,BioThings,BioThings-method btFields,BioThingsClient-method btFields,character-method |
| Get items from BioThings APIs | btGet btGet,BioThingsClient-method btGet,character-method btGet,missing-method |
| btMetadata | btMetadata btMetadata,BioThings,BioThings-method btMetadata,BioThingsClient-method btMetadata,character-method |
| btQuery | btQuery btQuery,BioThingsClient-method btQuery,character-method btQuery,missing-method |
